RetrogeneDB ID: | retro_etel_1271 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_238893:6391..6656(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LAMTOR3 | ||
Ensembl ID: | ENSETEG00000009065 | ||
Aliases: | None | ||
Description: | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606] |
Percent Identity: | 54.95 % |
Parental protein coverage: | 71.77 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | ANDNAPEHALRP-GFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRLPLVVSF-IASSNANTGLI |
A.D..PE.ALRP.G...TF.L.TD.GSKL.LSK..SIIC..NT...VQFN..PLV.SF..A......... | |
Retrocopy | ASDSVPEPALRP<GVSPTFVLETDPGSKLSLSKIESIICCCNTCLGVQFNP*PLVASF<LAGISPARAVT |
Parental | VSLEKELAPLFEELRQVVEVS |
..L..ELAPLF..LRQV..VS | |
Retrocopy | ARLKEELAPLFQALRQVMGVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |