RetrogeneDB ID: | retro_etel_1288 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_242570:4488..4828(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 75.21 % |
Parental protein coverage: | 73.25 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTSTVSRDIDTAAKFIG-AGAATVGVAG-SGAGIGTV |
VLVQK..ETL.DE.FSSLTAP.S.TSL.PS.SF..S..SRDI.TAAKFIG..GAATVGVA..SG.GI.T. | |
Retrocopy | VLVQKQLETLTDEHFSSLTAPGSLTSLIPSHSF*VSIISRDIHTAAKFIG<GGAATVGVAS<SGVGIRTG |
Parental | FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
FGSLI.G.AR.PSLKQ.LF.Y.ILGFA.S.AMGLFCLM.AFLILFAM | |
Retrocopy | FGSLILGCARTPSLKQ*LF-YTILGFAFSKAMGLFCLMTAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |