RetrogeneDB ID: | retro_etel_1342 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_249886:4186..4487(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL18 | ||
Ensembl ID: | ENSETEG00000013157 | ||
Aliases: | None | ||
Description: | ribosomal protein L18 [Source:HGNC Symbol;Acc:10310] |
Percent Identity: | 58.25 % |
Parental protein coverage: | 53.19 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | DVRCQEVPKLKVCALRVSSRARSRILK-AGGKILTFDQLALDSPKGCGTV-LLSGPRKGREVYRHFGKAP |
DV..QEVPKLKV..L.VSS.....ILK..G.KIL...QLA..S.KG..TV.L.S.PRKG.EV...F.K.. | |
Retrocopy | DVQVQEVPKLKVHHLCVSSWTQNCILK>MGSKILP*NQLAPGSCKGR*TV<LVSSPRKGCEVCSDFTKLS |
Parental | GT-PHSHTKPYVRSKGRKFERARGRRASRGYKN |
G..PHSHTKPYV..KG..F...RG.R.S.GYKN | |
Retrocopy | GS>PHSHTKPYVCLKGQQFKCPRGPRVSLGYKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |