RetrogeneDB ID: | retro_etel_1353 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_251962:8098..8323(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRRG4 | ||
Ensembl ID: | ENSETEG00000008749 | ||
Aliases: | None | ||
Description: | proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:HGNC Symbol;Acc:30799] |
Percent Identity: | 75. % |
Parental protein coverage: | 51.01 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | CNYEEAREVFVDEDKTMKFWQEYTIQGPSPKSEDHGEKVDAFGLLIGLIAAGVFFIISGLLCYYICIPKC |
CN.EE.RE.FVDEDKTM.F.QEYT..G.SPKSE...EKVDAFGL..G.IAAGV...ISGLL.YYICIPKC | |
Retrocopy | CN-EEPREIFVDEDKTMTFCQEYTVKGSSPKSEGQREKVDAFGLMTGMIAAGVVLVISGLLGYYICIPKC |
Parental | RRQQSS |
.RQQSS | |
Retrocopy | QRQQSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Echinops telfairi | ENSETEG00000008749 | 1 retrocopy |
retro_etel_1353 ,
|