RetrogeneDB ID: | retro_etel_1411 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_261478:3428..3767(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SAP18 | ||
Ensembl ID: | ENSETEG00000005565 | ||
Aliases: | None | ||
Description: | Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530] |
Percent Identity: | 79.65 % |
Parental protein coverage: | 73.86 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LLLRVLTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLK |
LLL.V.TTN.G.HH.MDEFS..NVPSS.L.IYTWMDATLKELT.LV.E.YPEARKKGTHFNF.IVFTDLK | |
Retrocopy | LLLQVFTTNQGCHHGMDEFSHRNVPSSKLPIYTWMDATLKELTNLVEEAYPEARKKGTHFNFVIVFTDLK |
Parental | RPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPP |
R.GYRVKEIGS...GRKGT.DSM.LQSQKFQ..DYLDIAI..P | |
Retrocopy | RSGYRVKEIGSIILGRKGTRDSMPLQSQKFQRRDYLDIAISVP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |