RetrogeneDB ID: | retro_etel_1438 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_265262:2755..3117(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000002444 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSETEG00000015044 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 81.97 % |
Parental protein coverage: | 69.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVP-KGATYGKPVHHGVNQLKFARSLQSVAEERAGR |
P..T.PDKA.RLGYKAKQGYVIYRIRVR.GG.K.PVP.KGAT..KPVHHGVN.LKFA.SLQSVA.ERAG. | |
Retrocopy | PAHTQPDKAHRLGYKAKQGYVIYRIRVRHGGLKCPVP<KGATSDKPVHHGVNHLKFA*SLQSVAGERAGC |
Parental | HCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHRE |
HC.ALRVLNSYWVGED.T.K.FEVIL.DP.HKA.RRNPDTQWITKPVHKHR. | |
Retrocopy | HCAALRVLNSYWVGEDPTHKLFEVILVDPIHKADRRNPDTQWITKPVHKHRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |