RetrogeneDB ID: | retro_etel_1483 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_272713:877..1116(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 87.65 % |
Parental protein coverage: | 89.89 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | RLSYNTASNKTRLSRTPGNRIVY-LYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAY |
RLSYNTASNKTRL.RTPGNR.VY.LYTKKVGK.P.SAC.VCP.RL.GVRAVRPKVLMRLSKTKKHV.RAY | |
Retrocopy | RLSYNTASNKTRLFRTPGNRTVY<LYTKKVGKVPTSACAVCPSRL*GVRAVRPKVLMRLSKTKKHVRRAY |
Parental | GGSMCAKCVRD |
GGSMC.KCVRD | |
Retrocopy | GGSMCTKCVRD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |