RetrogeneDB ID: | retro_etel_1495 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_274607:1..338(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSETEG00000004002 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 77.39 % |
Parental protein coverage: | 54.59 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | VRTKTLVKNCIVLVDSTPYRQWYESHYALPLGRKKGAKLTPEEEETLNKKRSKKIQKKYDERKKNAKISS |
..TK.LVKNCI.L.DST.Y.Q.YESHYALPLG..KG.KLTPEEEE.LNKKRSKKIQKKYDE.KK.A.ISS | |
Retrocopy | LQTKMLVKNCILLIDSTLYCQ*YESHYALPLG*TKGDKLTPEEEEILNKKRSKKIQKKYDEWKKKANISS |
Parental | LLEEQFQQ-GKLLACIASRPGQCGRADGYVLEGKELEF-YLRKIK |
.L.E.FQ..GKLLAC.ASRPG.CG.ADG.VLEGK.LEF.YLRKIK | |
Retrocopy | FLGEPFQR<GKLLACVASRPGHCG*ADGSVLEGKKLEF<YLRKIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |