RetrogeneDB ID: | retro_etel_1496 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_274613:7231..7611(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 68.22 % |
Parental protein coverage: | 94.12 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MGKFMKPGKVVLVLAGRYSGRKAV-IVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIK |
MGKF.KP.KVV.VLA...SG.K...IVKN.D.GT.D.PYSHALV.G.DRYP.KV.AA.GKKKIAKRSKIK | |
Retrocopy | MGKFTKPRKVVPVLA*G*SGHKVT<IVKNMDNGTADCPYSHALVDGLDRYPCKVAAARGKKKIAKRSKIK |
Parental | SFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNK |
SFVKVY..NHLMPTR.S.DI.LDKTV..KDV.RD.A.K..A..EAKVK.E.....G..K | |
Retrocopy | SFVKVYSCNHLMPTRHSMDILLDKTVI-KDVCRDSAFKLEAQQEAKVKSEKYKTSGSSK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |