RetrogeneDB ID: | retro_etel_1515 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_276624:58976..59240(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 72.22 % |
Parental protein coverage: | 98.88 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | VQRLTYRRRLSY-NTASNKTRLSRTPGNRIV-YLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSK |
VQ.L.YR.RLSY..TASNKT.L..TP..RIV...YTKKVGKAPK.AC.VCPG.LRGV.AVRPKVLM.LSK | |
Retrocopy | VQQLIYRCRLSY>HTASNKTKLP*TPCHRIV<SFYTKKVGKAPKYACDVCPG*LRGVHAVRPKVLMGLSK |
Parental | TKKHVSRAYGGSMCAKCVRD |
T.KH.S..Y..SMCAKCV.D | |
Retrocopy | TNKHISKVYVSSMCAKCV*D |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |