RetrogeneDB ID: | retro_etel_1536 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_277489:4677..5059(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSETEG00000009967 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 70.23 % |
Parental protein coverage: | 52.85 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | ESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYY-EI |
....FYL.MK.D..RYL.EV..GD.K...V..SQQAYQ.A.EISKKEMQ..HPIRLGLALNFSV..Y.EI | |
Retrocopy | DPQCFYLNMK-DC*RYLAEVVAGD-KKGIVDQSQQAYQAACEISKKEMQREHPIRLGLALNFSV-FY>EI |
Parental | LNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEADAGEG |
LN.PEKACS.AK.A.DEAI.ELD.L.EES..DSTL.MQLL.DNL.LWTS..QGDEA.AGEG | |
Retrocopy | LNFPEKACSFAKDASDEAIVELDMLSEES*RDSTLTMQLLSDNLALWTSDTQGDEAEAGEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |