RetrogeneDB ID: | retro_etel_1657 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_286097:42685..42977(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 65. % |
Parental protein coverage: | 76.56 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIE-PSLRQLAQKYNCDKMICRKC |
Q.....P.DQQRLIFAGKQL.DG.TLSD.NIQ.ESTLHLVLRLRGGII...SL.QLAQK.N..K..C..C | |
Retrocopy | QGRHHPPLDQQRLIFAGKQLADGHTLSDSNIQRESTLHLVLRLRGGIIG<LSLHQLAQKHNFNKIACCQC |
Parental | YARLHPRAV-NCRKKKCGHTNNLRPKKKVK |
.A.LH..AV..C.K.KCGH.N.L.P.KK.. | |
Retrocopy | EACLHSHAV<HCHKRKCGHANSLCPEKKAQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |