RetrogeneDB ID: | retro_etel_1684 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_287412:73..480(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 82.98 % |
Parental protein coverage: | 87.26 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | TAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTST |
TAPHPL.MYACAKFVSTPSLVRSTSQLL.RPLSVLVQK.PETL.DERFSSLTAPRS.TSL.PSRSFQTST | |
Retrocopy | TAPHPLTMYACAKFVSTPSLVRSTSQLLTRPLSVLVQKQPETLTDERFSSLTAPRSLTSLIPSRSFQTST |
Parental | VSRDIDTAAKFIGAGA-ATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAIL-GFA-LSEAM-GLF |
VS.D.DTAAK..GAG..ATVGVAGSGAG.GT.FGSLI.G.AR...LKQQLFSYA.L.GFA.L.EAM.GLF | |
Retrocopy | VSGDMDTAAKCTGAGM<ATVGVAGSGAGTGTGFGSLILGDARTSALKQQLFSYALL<GFA<LAEAM<GLF |
Parental | C |
C | |
Retrocopy | C |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |