RetrogeneDB ID: | retro_etel_1698 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_288185:7082..7571(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTP4A1 | ||
Ensembl ID: | ENSETEG00000008183 | ||
Aliases: | None | ||
Description: | protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634] |
Percent Identity: | 68.71 % |
Parental protein coverage: | 94.22 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTALVEKEGIHVLDWPF |
MA..N...PVE..YKNMRFL...NP..A....FIEELKK.GVTT.VRVCEATY..A..E.EGI.VLDW.F | |
Retrocopy | MAASNHFIPVEIAYKNMRFLMGQNPSHAFFDRFIEELKKNGVTTLVRVCEATYNSAMLEREGIQVLDWLF |
Parental | DDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGA |
DDGA.P..QIV..WL.LVK..F.E.P..CIAVHC..GLGRAPVLVA.AL.E.GMK.E.AVQFIRQKRRGA | |
Retrocopy | DDGAAPPSQIVEQWLHLVKMNFHENPESCIAVHCGTGLGRAPVLVAIALMEKGMKCEKAVQFIRQKRRGA |
Parental | FNSKQLLYLEKYRPKMRLRFKDS |
FNSKQLLYLE.Y.PK...RF..S | |
Retrocopy | FNSKQLLYLENYQPKKCVRFRNS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |