RetrogeneDB ID: | retro_etel_1703 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_288272:5269..5555(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004510 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.29 % |
Parental protein coverage: | 84.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PIRCTNCARCVPKDKAI-KKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSK-VVRNR |
PI.C.N....VPKDKAI..K..IRN.VE.A..RDISEASVF.AY.LPKL..KLHYCV.CAIHS..VVRN. | |
Retrocopy | PIHCINYSCGVPKDKAI<SKCRIRNTVELADIRDISEASVFNAYMLPKLHSKLHYCVTCAIHSR<VVRNP |
Parental | SREARKDRTPPPRFRPAGAAPRPPPKPM |
S.E..KD.TP....RP..A.PR.PPK.M | |
Retrocopy | SYEILKD*TPLTGLRPVCAIPRLPPKSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |