RetrogeneDB ID: | retro_etel_1707 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_288572:1616..1841(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 67.09 % |
Parental protein coverage: | 59.38 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE-GIP-PDQQRLIFAGKQLEDGRTLS-DYNIQKESTL |
M.I.VKTL.GK.I.LE..PS.T.E....KIQDKE.G.P.P.Q.RLI.AG.QL.DG.TLS.DYNIQKESTL | |
Retrocopy | MWISVKTLPGKAISLEADPSNTLETANVKIQDKE<GHP<PGQ*RLILAGQQLGDGGTLS<DYNIQKESTL |
Parental | HLVLRLRGG |
.L.LRL.GG | |
Retrocopy | *LGLRLCGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |