RetrogeneDB ID: | retro_etel_1708 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_288600:41950..42433(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.88 % |
Parental protein coverage: | 64.92 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | AVAEKKKAAPAVPETLKKKRRNFAELKIKRLRKKFA-QKMLRMARRKLIYEKAKHY-HKEYRQMYRTEIR |
.V.EK....P..P...KKK.RN...LKIKRLRKKFA...ML..ARR..IYEKAKHY..KE.RQ..RTEIR | |
Retrocopy | SVVEKENKGPCLPKPFKKK*RNSTGLKIKRLRKKFA<PRMLQKARRTPIYEKAKHY<SKECRQLCRTEIR |
Parental | MARMARKAGNFYVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYI |
.AR.ARKAGNF.VPGEP.L.FV.RIRGI.GVSPKV.K.L.LL....IF.G..VKLNKA.INMLRIVEPYI | |
Retrocopy | KARVARKAGNFHVPGEPTLVFVVRIRGISGVSPKVQKMLWLLCFHPIFHGSVVKLNKA*INMLRIVEPYI |
Parental | AW-GYPNLKSVNEL-IYKRGYGKIN |
.W.GY.NL.SV.EL.IYK.GYGK.N | |
Retrocopy | VW<GYANLQSVSELMIYKCGYGKTN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |