RetrogeneDB ID: | retro_etel_1714 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_289336:38520..38951(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000006941 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.1 % |
Parental protein coverage: | 65.92 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | TGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKE |
.G...G......PKI.P.GLS.KKVGD...KA..D.KG.R.TVK...QNRQ.....VPSASAL.I.ALKE | |
Retrocopy | SGVRWGSRCPSGPKINPPGLSRKKVGDAMVKAADD*KG*RMTVKWVTQNRQG----VPSASALMIRALKE |
Parental | PPRDRKKQKNIKHSGNVTFDEIVGIARQMRHRSLARELSGTIKEILGTAQSVGCNV-DGR-HPHDIIDDI |
.PRD..KQKNIKHSGN.TF.EI.G.AR.....SLARE.SG.IKEIL.TA.SVGC.V..GR.HPHDIIDDI | |
Retrocopy | QPRDGEKQKNIKHSGNITFNEIIGLARYRGR*SLARERSGIIKEILKTAHSVGCHV>NGR>HPHDIIDDI |
Parental | NSGAVECPA |
NSGAVEC.A | |
Retrocopy | NSGAVECSA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |