RetrogeneDB ID: | retro_etel_172 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2976:285176..285416(-) | ||
Located in intron of: | ENSETEG00000004211 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSETEG00000003217 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 78.31 % |
Parental protein coverage: | 50.31 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KALKIPVPEDKFTAL-VDAEEKEDVKTCAEFVSLSKTRIEEYEKQVVRMRNIIPFDQMTLD-DLNEVFPE |
KALKIP..EDKFTAL.VD.EEK.DVKTCA.FVSLSKTRIEEYEKQ....RNIIPFDQM..D..LNEVFPE | |
Retrocopy | KALKIPLLEDKFTAL>VDTEEK-DVKTCAKFVSLSKTRIEEYEKQLEKIRNIIPFDQMAVD<PLNEVFPE |
Parental | TKLDKTKYPYWPH |
T...KT.YPYWPH | |
Retrocopy | TL*AKTQYPYWPH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |