RetrogeneDB ID: | retro_etel_1720 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_289899:168249..168987(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000008433 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.23 % |
Parental protein coverage: | 99.6 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | EAVAEKKKAAPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIRM |
EAV.EKKK..PAV.ETLK.KRRNFAELKIKRLRKKFAQKML..ARRKLIYEKAKHYHKEYRQM..T...M | |
Retrocopy | EAVGEKKKV-PAVAETLKQKRRNFAELKIKRLRKKFAQKMLQKARRKLIYEKAKHYHKEYRQMCKTVF*M |
Parental | ARMARKAGNFYVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYIA |
A.MARK.GN.YVPGEPKLAFVIRI.GINGVSPKVR.VLQLL.LRQI.N..FVKL.KAS.NMLRI.EPYIA | |
Retrocopy | AWMARKDGNCYVPGEPKLAFVIRISGINGVSPKVRNVLQLLCLRQISNSTFVKLTKASVNMLRIMEPYIA |
Parental | WGYPNLKSVNELIYKRGYGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPF |
WGYP.LKSVNELIYKRG.GKI.KKR.ALTDNTLIA.SLG.YGIICMEDLIHEIY.VGKRFKEANNFL.PF | |
Retrocopy | WGYPALKSVNELIYKRGDGKITKKRVALTDNTLIAWSLGQYGIICMEDLIHEIYAVGKRFKEANNFL*PF |
Parental | KLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
KLSS.RGGMKKKTT.FVEGGDAGNREDQINRLIRRMN | |
Retrocopy | KLSSLRGGMKKKTTQFVEGGDAGNREDQINRLIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |