RetrogeneDB ID: | retro_etel_1724 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_290102:38..362(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FUNDC2 | ||
Ensembl ID: | ENSETEG00000013817 | ||
Aliases: | None | ||
Description: | FUN14 domain containing 2 [Source:HGNC Symbol;Acc:24925] |
Percent Identity: | 72.07 % |
Parental protein coverage: | 54.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EKYSVTTQLLXXXXXXXCTGFIFQKVGKLAATAVGGGFFLLQIANHTGYIKVDWKRVEKDMKKAKEQLKI |
.K.S...QLL.......CTGF.FQKVGKLAATAVGGGF.LLQ.ANHTGYIKVDW.RVEKDMKKA.E.LK. | |
Retrocopy | KKHSTVPQLLIGGATGWCTGFLFQKVGKLAATAVGGGFLLLQLANHTGYIKVDWQRVEKDMKKAQEHLK- |
Parental | DKSNQISSEVKSKAEAVVSFVKKNVLVTGGFLGGFLLGMAS |
..S....SEV.SK.EAVVSF.KKN.L.TGGFLGGFLLG.AS | |
Retrocopy | --SPRMPSEVESKTEAVVSFAKKNILATGGFLGGFLLGLAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |