RetrogeneDB ID: | retro_etel_1745 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_291597:35185..35447(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 70.45 % |
Parental protein coverage: | 97.75 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCP-GRLRGVRAVRPKVLMRLSKT |
VQRLT.R.RLS.N..SN.TRLSRT.GNRIV.LY.KKVG.APKSA.G.CP.....G..AVRPK.LMRLS.T | |
Retrocopy | VQRLTSRCRLSHNRTSNETRLSRTSGNRIVALYAKKVGEAPKSAHGTCP>ADFKGGCAVRPKALMRLSRT |
Parental | KKHVSRAYGGSMCAKCVR |
K..VSRAYGGS.CA.CV. | |
Retrocopy | KQYVSRAYGGSGCAECVQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |