RetrogeneDB ID: | retro_etel_1748 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_291698:40652..41441(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLC25A3 | ||
Ensembl ID: | ENSETEG00000012678 | ||
Aliases: | None | ||
Description: | solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 [Source:HGNC Symbol;Acc:10989] |
Percent Identity: | 74.9 % |
Parental protein coverage: | 72.65 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVLYSNMLGEENSYLWRTSL |
VDP.KYK.I..GF.VT..EDGVRGLA.GWAPTF.GYSMQGL.KFG.YE.FK..Y...LGEE..YLWRT.L | |
Retrocopy | VDPHKYKSIVSGFRVTVQEDGVRGLARGWAPTFFGYSMQGLFKFGLYEAFKIRYAELLGEERAYLWRTGL |
Parental | YLASSASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMFKEEGLYAXXXXXXXXXXXXXXXXXXK |
YLA.SASAEFFAD.ALAPMEAAKVR.QTQPGYA.TLR.AAP.MF.EEGL.A..................K | |
Retrocopy | YLAASASAEFFADVALAPMEAAKVRVQTQPGYARTLRAAAPRMFAEEGLRAFYKGVAPLWLRQVPYTMMK |
Parental | FACFERTVDPLYKFVVPKPRSECSKGEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSTASQVLL |
FACFERTV..LYK.VVPKP.S.C.K.EQL.VTFVAGYIAG.FCAIVSHPADSVVSVLNKEKGSTA..VL. | |
Retrocopy | FACFERTVEALYKYVVPKPQSQCTKAEQLGVTFVAGYIAGIFCAIVSHPADSVVSVLNKEKGSTALGVLR |
Parental | RLGFKGVWKGLFARIIMIGTLTALQWFIYDSVKVYFRLPRPPPPEMPESLKKK |
.LGF.GVWKGLFARI.MIGTLTALQWFIYDS.KVY.RLPRPP...MPESLKKK | |
Retrocopy | ALGFVGVWKGLFARIVMIGTLTALQWFIYDSMKVYLRLPRPPVARMPESLKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |