RetrogeneDB ID: | retro_etel_1762 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_292542:56746..57113(+) | ||
Located in intron of: | ENSETEG00000002822 | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000002825 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAE | ||
Ensembl ID: | ENSETEG00000012056 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] |
Percent Identity: | 86.61 % |
Parental protein coverage: | 52.79 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | AEFATGNDRKEAAENSLVAYKAASDIAMTELP-PTHPIRLGLALNF-SVFYYEIL-NSPDRACRLAKAA- |
AEFATG.DRKE.AENSLVAYKAASDIAMTELP.PTHPIR..LALNF.SVFYY..L...PDRACRLAKAA. | |
Retrocopy | AEFATGTDRKETAENSLVAYKAASDIAMTELP>PTHPIRFCLALNF<SVFYYKML<SIPDRACRLAKAA< |
Parental | FDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEALQDVEDENQ |
FDDA.AELDTLSE.SYK.STLIMQLLRDNLTLWTSD.QGDGEEQNKEALQDVEDE.Q | |
Retrocopy | FDDATAELDTLSEGSYKASTLIMQLLRDNLTLWTSDRQGDGEEQNKEALQDVEDEDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |