RetrogeneDB ID: | retro_etel_1773 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_293889:112204..112444(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMEM159 | ||
Ensembl ID: | ENSETEG00000007187 | ||
Aliases: | None | ||
Description: | transmembrane protein 159 [Source:HGNC Symbol;Acc:30136] |
Percent Identity: | 59.26 % |
Parental protein coverage: | 51.27 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AEEEPSGISKLPKMFHLLTESIQTNSKVVAFMKSPVGQYLDRHPFLTLTLLVFIAMSSIPVGFFLLVLVL |
A.E......KLPK...LL.ES.QTNSKV.A..KS.VGQY.DRH..LTLTLL.FIAMS.I.V.F..L.... | |
Retrocopy | APEYLKALQKLPKKLYLLIESNQTNSKVIALSKSLVGQYSDRH-LLTLTLLMFIAMSTIKVEFSRLLVLV |
Parental | TSLAAFVGVIL |
.SLA.FV.VI. | |
Retrocopy | ASLADFVQVII |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Echinops telfairi | ENSETEG00000007187 | 1 retrocopy |
retro_etel_1773 ,
|
Sarcophilus harrisii | ENSSHAG00000005768 | 1 retrocopy |