RetrogeneDB ID: | retro_etel_181 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3163:119018..119294(+) | ||
Located in intron of: | ENSETEG00000015786 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004510 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.5 % |
Parental protein coverage: | 81.58 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | CTNCARCVPKDKAIKKFVIRNIVEAAAVR-DISEASVFDAYVLPKLYVKLHYCVSCA-IHSKVV-RNRSR |
CTNCARCVPK.KAIKKF.IRNIVEAAAV..DISEASVFDAYVLPKLYVKLHYCVSCA..HSKVV.RN.SR | |
Retrocopy | CTNCARCVPKAKAIKKFIIRNIVEAAAVE<DISEASVFDAYVLPKLYVKLHYCVSCA<LHSKVV<RNWSR |
Parental | EARKDRTPPPRFRPAGAAPRPPPKPM |
EARKD.TPPP.FR.AGAAPRP.PKPM | |
Retrocopy | EARKD*TPPPQFRLAGAAPRPLPKPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |