RetrogeneDB ID: | retro_etel_1833 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_304697:4258..4676(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000014875 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.57 % |
Parental protein coverage: | 74.73 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | GTALRGLLCGPRVPGPSPVRQSSGGPSWTPERTLVAVKPDGVQRRLVGDV-IRRFERRGFRLVGMKMLQA |
GT.L.GLLCG.R.PGPSPVRQSSGGPSWT.ERTLVAVKPDGVQR.LVG.V.IRR..R.GFRLVG.KMLQA | |
Retrocopy | GTVLPGLLCGTRLPGPSPVRQSSGGPSWTLERTLVAVKPDGVQRWLVGNV>IRRLQR*GFRLVGKKMLQA |
Parental | PESILAEHYHDLRRKPFYPALISYMSSGPLVAMVWEGHNVVRTSRAMIGDTDSSEAAPGTIRGDFSIHIS |
PESILAEHYH.LRRK.FYPALISYMSSG.LVAMVW.GHNVV.T..AMI.DTD.SEA.PGTIRGDFS.HIS | |
Retrocopy | PESILAEHYHHLRRKSFYPALISYMSSGALVAMVWDGHNVVWT*KAMIRDTDPSEATPGTIRGDFSVHIS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |