RetrogeneDB ID: | retro_etel_1839 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_305787:1964..2193(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CKS2 | ||
Ensembl ID: | ENSETEG00000001260 | ||
Aliases: | None | ||
Description: | CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000] |
Percent Identity: | 55.7 % |
Parental protein coverage: | 97.47 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | HKQIYYSDKYFDEHY-EYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSL-GWVHYMIHEPEPHILLFR |
HKQ.Y.SDKYF.EH..E.....LP..L.KQ.P.THL.SEE..R.L..Q..L....HY...EP..HILLFR | |
Retrocopy | HKQMYFSDKYFAEHV<EHWLATLPKGLYKQAPQTHLGSEEQ*RGLHFQKDL<DCIHYLTREPDLHILLFR |
Parental | RPLPKEQQK |
..LPKEQ.K | |
Retrocopy | QALPKEQ*K |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |