RetrogeneDB ID: | retro_etel_1848 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_306800:15672..16037(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL35 | ||
Ensembl ID: | ENSETEG00000000876 | ||
Aliases: | None | ||
Description: | ribosomal protein L35 [Source:HGNC Symbol;Acc:10344] |
Percent Identity: | 85.37 % |
Parental protein coverage: | 99.19 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRK |
AK.KARDL..KKKEELL.QLDDLKVELSQLRVAKVTGGAASKL..IRVVRKSIARVLTVINQ.QKENLRK | |
Retrocopy | AKSKARDLSSKKKEELLRQLDDLKVELSQLRVAKVTGGAASKLPQIRVVRKSIARVLTVINQPQKENLRK |
Parental | FYKGKKYKPLDLRPKKTRAMRRRLN-KHEESLKTRKQQRKERLYPLRKYAVKA |
FYKGKKYKPLDL.PKKTRA.RRRLN..HEES.KTR.QQRKE.L.PL.K.A.KA | |
Retrocopy | FYKGKKYKPLDLGPKKTRAVRRRLN<QHEESPKTRTQQRKEPLDPLPKDAGKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |