RetrogeneDB ID: | retro_etel_1882 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_311140:128021..128483(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000001007 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.7 % |
Parental protein coverage: | 53.47 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SDSSARDSQEEFLENPWKERSKPEEPSDLIGPEAPKTLASQDDKPLNYGHALLPGEGAAMAEYVKAGKRI |
SDSSARDSQEEFLE.PWKERSKPEEPSDLIGPEAPKTLASQDDKPLNYG.ALLPGEGAAMAEYVKAGKRI | |
Retrocopy | SDSSARDSQEEFLETPWKERSKPEEPSDLIGPEAPKTLASQDDKPLNYGYALLPGEGAAMAEYVKAGKRI |
Parental | PRRGEIGLTSEEIASFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASF |
PRRGEIGLTSEEIASFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASF | |
Retrocopy | PRRGEIGLTSEEIASFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASF |
Parental | REMVYRKTKGKDDK |
REMVYRKTKGKDDK | |
Retrocopy | REMVYRKTKGKDDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000018433 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000000072 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000001007 | 1 retrocopy |
retro_etel_1882 ,
|
Felis catus | ENSFCAG00000004392 | 1 retrocopy | |
Homo sapiens | ENSG00000101882 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000002962 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000012382 | 1 retrocopy | |
Mus musculus | ENSMUSG00000016409 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000014922 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000001004 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000020679 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000022233 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000031169 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000012613 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000001134 | 1 retrocopy |