RetrogeneDB ID: | retro_etel_1931 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_316163:67842..68149(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL35 | ||
Ensembl ID: | ENSETEG00000000876 | ||
Aliases: | None | ||
Description: | ribosomal protein L35 [Source:HGNC Symbol;Acc:10344] |
Percent Identity: | 64.08 % |
Parental protein coverage: | 82.11 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKIKARDLRG-KKKEE-LLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKEN |
M.K.KA.D..G.KK.E..LL.QL.DL.V.LS.L.VAKVTG.AASKLSKIRVVRKS.ARV.TVINQT.KEN | |
Retrocopy | MVKFKAWDHSGKKKEEL>LLTQLEDLQVQLS*LHVAKVTGRAASKLSKIRVVRKSVARVVTVINQTPKEN |
Parental | LRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEES |
LRKFYK.K..K.L.L.P.K..A........EE. | |
Retrocopy | LRKFYKDKQVKTLGLWPQKPPAPQQAGGEPEEA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |