RetrogeneDB ID: | retro_etel_1974 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_321338:96783..97358(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000001637 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013325 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.08 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MSSKVSRDTLY-AVREVLLGDLRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGD |
MSSKVS..TLY.A.REVL.G..RKRRKFLETVELQISLKNYDPQKDK.FSGTVRLKST.RPKFSVCVLGD | |
Retrocopy | MSSKVSHNTLYEAMREVLHGKQRKRRKFLETVELQISLKNYDPQKDKCFSGTVRLKSTLRPKFSVCVLGD |
Parental | QQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTH |
QQ.CDEAKAVD.PHMDIEAL.KLN.NKKLVKKLAK.YDAFLASESLIKQIP.ILGPGLN.AGKFPSLL.H | |
Retrocopy | QQRCDEAKAVDTPHMDIEALQKLNENKKLVKKLAKRYDAFLASESLIKQIPPILGPGLNQAGKFPSLLPH |
Parental | NENMVAKVDEVKSTIKFQMKKVLCLAVAV-GHVKMTDDELVYNIHLAVNFLVS |
NEN.VAKVDEVKSTIKFQMKKVLCLAVAV.GHVKMT.DELVYNI.L.VN.LVS | |
Retrocopy | NENLVAKVDEVKSTIKFQMKKVLCLAVAV<GHVKMTEDELVYNILLSVNSLVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |