RetrogeneDB ID: | retro_etel_2 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_276014:6043..6481(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000000837 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000008645 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.62 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQVMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPM |
MAEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQ.MQLYSARQRRRLNRGLRRKQHSLLKRLR.AKKEAPPM | |
Retrocopy | MAEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRRAKKEAPPM |
Parental | EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSR |
EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSR | |
Retrocopy | EKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSR |
Parental | FIPLK |
FIPLK | |
Retrocopy | FIPLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000019718 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000005632 | 13 retrocopies | |
Cavia porcellus | ENSCPOG00000003968 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000000706 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000008645 | 1 retrocopy |
retro_etel_2 ,
|
Felis catus | ENSFCAG00000010769 | 1 retrocopy | |
Homo sapiens | ENSG00000115268 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000002818 | 4 retrocopies | |
Macaca mulatta | ENSMMUG00000003050 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000005119 | 1 retrocopy | |
Mus musculus | ENSMUSG00000063457 | 8 retrocopies | |
Nomascus leucogenys | ENSNLEG00000001651 | 8 retrocopies | |
Otolemur garnettii | ENSOGAG00000015776 | 4 retrocopies | |
Pongo abelii | ENSPPYG00000009317 | 4 retrocopies | |
Pteropus vampyrus | ENSPVAG00000003168 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000024603 | 8 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000013424 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000023248 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000006423 | 2 retrocopies |