RetrogeneDB ID: | retro_etel_2003 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_323705:44338..44646(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSETEG00000007443 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 77.88 % |
Parental protein coverage: | 76.3 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MATLEQFVGRWRLVDSKGFDEYMKELGVGMALRKMGAMAKPDCIITCDGKTLTVKTESTLKTTQFSCNLG |
MA...QF.GRW.LVDSKG.DEYMKELGVGMAL.KMGAMAKPDC.ITCDG..LTVKTESTLK....SC..G | |
Retrocopy | MASIQQFAGRWHLVDSKGCDEYMKELGVGMALPKMGAMAKPDCVITCDGQALTVKTESTLKSMLPSCKPG |
Parental | EKFEE-TTADGRKTQTVCDFADGALVQHQDWDGK |
EKFEE.TTADGRKTQTVC..ADGALVQ.QD...K | |
Retrocopy | EKFEE<TTADGRKTQTVCNLADGALVQAQDCNNK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |