RetrogeneDB ID: | retro_etel_2006 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_32405:1753..2096(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004510 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.79 % |
Parental protein coverage: | 99.12 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | TKKRRNNGRAKKGRGH-VQPIRCTNCA-RCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYV |
TKKRRN.GRAKKG.GH.VQPIRC.N.A.RC..K.KAIKKF.IR..VE.A..RDISEASVFD..VLP.LYV | |
Retrocopy | TKKRRNKGRAKKGHGH>VQPIRCANGA<RCTRKVKAIKKFHIRDTVETAGLRDISEASVFDTHVLPTLYV |
Parental | KLHY-CVSCA-IHSKVVRNRSREARKD--RTPPPRFRPAGAAPRPPPKP |
K.H...VSCA.IH.K.VRNRSREA.KD..R.P.PRFRPAGAAPRPPPKP | |
Retrocopy | KPHD<LVSCA<IHRKMVRNRSREAPKDPTRPPAPRFRPAGAAPRPPPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |