RetrogeneDB ID: | retro_etel_201 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_352:130451..130716(-) | ||
Located in intron of: | ENSETEG00000009415 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 73.63 % |
Parental protein coverage: | 84.62 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | RKANKTHTLCRRCGSKAYHLQKSTCGKCGYPA-KRKRKYNWSAKAKRR-NTTGTGRMRHLKIVYRRFRHG |
...NK.HTLCR.CGSKAY..QK.TCGKCG.PA.KRK.KYNWSAKAKRR.N.TGTGRMRHLK.V..RFR.G | |
Retrocopy | KRRNKKHTLCRSCGSKAYLPQKLTCGKCGSPA>KRK*KYNWSAKAKRR>NITGTGRMRHLKLVSCRFRRG |
Parental | FRE-GTTPKPKRAAVAASSSS |
FRE...TPKP.RAAVA.S..S | |
Retrocopy | FRE<RATPKPRRAAVAGSRAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |