RetrogeneDB ID: | retro_etel_2010 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_324444:604..948(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CDC42 | ||
Ensembl ID: | ENSETEG00000004443 | ||
Aliases: | None | ||
Description: | cell division cycle 42 [Source:HGNC Symbol;Acc:1736] |
Percent Identity: | 57.63 % |
Parental protein coverage: | 59.26 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | TDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVG-TQIDLRDDPSTIEKLAKNKQKPI-TPETA |
T.......SVVSPSS.ENVKEKW.PEITHHCP.TP.LL...T.IDL.DDPS....L..........P.TA | |
Retrocopy | TQMYVYSVSVVSPSSLENVKEKWAPEITHHCPNTPLLLLE<THIDLKDDPSLLRNLPRTNRSLS>APQTA |
Parental | EKLARDLKAVKYVECS-ALTQK---NAFDEAILAALEPPAPRKSRMSV |
EK.A..LKAVK..EC..ALT.K...NAFDEA..A.LEPP.P.KS...V | |
Retrocopy | EKPACNLKAVKSAECL<ALTLKDLNNAFDEAMPAVLEPPEPKKSQPQV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |