RetrogeneDB ID: | retro_etel_2023 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_33269:701..1072(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000012181 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000010379 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.95 % |
Parental protein coverage: | 59.81 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKA- |
MG.GDPNKPRGK.SS.AFF.QTCREEHK.KHPDSS.NFA.FSKKCSE.WKTMSA.EKSKFE.MAKSDKA. | |
Retrocopy | MGQGDPNKPRGKLSSAAFFTQTCREEHKTKHPDSSGNFAQFSKKCSESWKTMSA-EKSKFEEMAKSDKA< |
Parental | RYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDT |
..D.EMKN..PPK.DKKGK.KDP.APKRPPSAFFL.CS.HRPKI.SE.PGLS.GDT | |
Retrocopy | SPDWEMKNDMPPKSDKKGKRKDPKAPKRPPSAFFLSCSAHRPKIQSEPPGLSTGDT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |