RetrogeneDB ID: | retro_etel_2083 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_51782:2700..3066(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL6IP1 | ||
Ensembl ID: | ENSETEG00000020152 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697] |
Percent Identity: | 55.65 % |
Parental protein coverage: | 61.08 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | YYLDPSVLSGVSCFVMFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNVVKTRRRAVGWWERLFTL |
Y.LD.S.LS.VSCFVM.L.LADYLVPI.APR............QR.H.IC....K....A...W..LFTL | |
Retrocopy | YSLDASLLSCVSCFVMVLRLADYLVPIPAPRM--AEQASEQ*PQRCHDICNSLTKAQLGAESCWRCLFTL |
Parental | KEEKPKMYFVTMIIALAAVAWVGQQVHNLFLTYLIVTFALLLPGLNQHGIISKY |
K..K.K..F.T....LA.V.WV.QQVH.L.LTYLIVTF.LLL.GL.QH.I.S.Y | |
Retrocopy | KKGKSKIDFMTTVFSLASVPWVRQQVHSLLLTYLIVTFTLLLLGLKQHEILSTY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |