RetrogeneDB ID: | retro_etel_2094 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_54274:154..359(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 59.15 % |
Parental protein coverage: | 77.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGK-APKSACGVCPGRLRGV-RAVRPKVLMRLS |
MVQ.L.Y..RLSY.TASNKTR.S...G.RIVYLY..KVGK...KSA..VC.G.L.G...AVR.KV....S | |
Retrocopy | MVQHLSYQLRLSYDTASNKTRSSGVSGHRIVYLYVRKVGK<TSKSAGDVCLGQLGGM<GAVRAKVPTNVS |
Parental | K |
. | |
Retrocopy | R |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |