RetrogeneDB ID: | retro_etel_2123 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_67798:165..380(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 79.22 % |
Parental protein coverage: | 59.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL |
MQIFVKT.T.KTI.LEV.PS.T.ENVKAKIQDKEG.IPPDQ..LIFAGKQLEDGR.L.....QKESTLHL | |
Retrocopy | MQIFVKTSTWKTIPLEV*PSETTENVKAKIQDKEG<IPPDQPWLIFAGKQLEDGRSL----FQKESTLHL |
Parental | VLRLRGG |
VLRL.GG | |
Retrocopy | VLRLLGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |