RetrogeneDB ID: | retro_etel_2129 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_70976:880..1108(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000018816 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KXD1 | ||
Ensembl ID: | ENSETEG00000003390 | ||
Aliases: | None | ||
Description: | KxDL motif containing 1 [Source:HGNC Symbol;Acc:28420] |
Percent Identity: | 77.92 % |
Parental protein coverage: | 71.96 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | DDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMNERFLHHTRTLVEMKRDLDSIFRRVRTLKGKL |
DDV..I.LAQKNMLDR.EK.NEMLLNF.NLSSA.LQQMNE..LHHT.TLVE.KRDLD.I..R.RTLKG.L | |
Retrocopy | DDVHTITLAQKNMLDRLEKANEMLLNFKNLSSAHLQQMNEHSLHHTCTLVEVKRDLDGI-GRMRTLKGEL |
Parental | ARQHPEA |
A.QHPEA | |
Retrocopy | AQQHPEA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000010545 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000003390 | 2 retrocopies |
retro_etel_1213, retro_etel_2129 ,
|
Macropus eugenii | ENSMEUG00000013150 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000003489 | 1 retrocopy | |
Mus musculus | ENSMUSG00000055553 | 6 retrocopies | |
Rattus norvegicus | ENSRNOG00000019971 | 2 retrocopies |