RetrogeneDB ID: | retro_etel_2203 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_97471:5174..5447(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSETEG00000011923 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 72.53 % |
Parental protein coverage: | 57.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | HFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNETPKPEDIDE |
HFN.PKVQ..LSANT.A.TGHAEAKP.TEM.P.ILSQL.ADS.TS.RK.AE.FPRQVLD..TPK.ED.DE | |
Retrocopy | HFNYPKVQTPLSANTCALTGHAEAKPSTEMVPEILSQLVADSFTSPRK*AEHFPRQVLDSKTPKTEDVDE |
Parental | EDDDVXXLVENFDEASKNEAN |
ED..V..L..N.D.ASKNEAN | |
Retrocopy | EDEGVPDLIKNVDGASKNEAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |