RetrogeneDB ID: | retro_etel_232 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3943:120528..120942(+) | ||
Located in intron of: | ENSETEG00000002628 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005006 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.67 % |
Parental protein coverage: | 82.94 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | PRPMAGILRSVSQRPLGSLQPVTKGVESLICTEWIRHKFTRSRIPDKVFQPLPADHEKYGGDPQ-NPHKL |
P...AG.L.SV.QRP.G.LQ.VTK..E.LIC..WI.H.FTRS.IP..VFQPLPADHEKYGGDPQ.NP..L | |
Retrocopy | PNAIAGVLCSVVQRPPGDLQLVTK--ECLICRDWILHIFTRS*IPGNVFQPLPADHEKYGGDPQ<NPSEL |
Parental | HIVTRIKSTKRRPY-WEKDVIKMLGLGKAHTPQVHKN-IPSVNAKLKVVKHLIRIQPLKLPQGLPTEEDM |
H.VT..KST.R.P..W.K...KML...KAHTPQVH.N..PSV.A.L.V.KHLIRIQ.LKLPQGL.T.E.. | |
Retrocopy | HVVTKVKSTERWPF<WGKGTVKMLE*PKAHTPQVHTN<SPSVSAELTVMKHLIRIQLLKLPQGLRTKEGT |
Parental | SDTC |
SDTC | |
Retrocopy | SDTC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |