RetrogeneDB ID: | retro_etel_257 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_436:22358..22739(-) | ||
Located in intron of: | ENSETEG00000001823 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CDK2AP2 | ||
Ensembl ID: | ENSETEG00000006428 | ||
Aliases: | None | ||
Description: | cyclin-dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:30833] |
Percent Identity: | 95.28 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSYKPIAPAPSSTPGSSTPGPGTPVPT-GSVPSPSGSGPGAAAPFRPLFNDFGPPSMGYVQAMKPPGTQG |
MSYKPIAPAPSSTPGSSTPGPGTPVPT.GSVP..SGSG.GA.APFRPLFNDFGPPSMGYVQAMKPPGTQG | |
Retrocopy | MSYKPIAPAPSSTPGSSTPGPGTPVPTAGSVPLRSGSGLGADAPFRPLFNDFGPPSMGYVQAMKPPGTQG |
Parental | SQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAETERNART |
SQSTYTDLL.VIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAETERNART | |
Retrocopy | SQSTYTDLLWVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAETERNART |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000011370 | 1 retrocopy | |
Equus caballus | ENSECAG00000020079 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000006428 | 3 retrocopies |
retro_etel_257 , retro_etel_334, retro_etel_437,
|
Homo sapiens | ENSG00000167797 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000010159 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000011827 | 5 retrocopies | |
Nomascus leucogenys | ENSNLEG00000006438 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000008275 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000003966 | 9 retrocopies | |
Tupaia belangeri | ENSTBEG00000005476 | 2 retrocopies |