RetrogeneDB ID: | retro_etel_275 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4585:340342..340629(-) | ||
Located in intron of: | ENSETEG00000015126 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJC19 | ||
Ensembl ID: | ENSETEG00000006897 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528] |
Percent Identity: | 84.54 % |
Parental protein coverage: | 97.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | YVLQAMKHVEPQVKQ-VFQSLPKSAFSGGYYRGGFEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLN |
YVLQAMKHVEPQVKQ.VFQSLPKSA.SGG.Y.GGFEP.MTK.EAALILGVS.TANKGKIRDAH.RIMLLN | |
Retrocopy | YVLQAMKHVEPQVKQ>VFQSLPKSASSGGSY*GGFEPQMTKWEAALILGVSLTANKGKIRDAHQRIMLLN |
Parental | HPDKGG-SPYIAAKINEAKDLLEGQAK |
HPDKGG.SPYIAAKINEA.DL.....K | |
Retrocopy | HPDKGG>SPYIAAKINEAEDLFTRRPK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |