RetrogeneDB ID: | retro_etel_308 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5058:121109..121576(+) | ||
Located in intron of: | ENSETEG00000011583 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSETEG00000007922 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 75.95 % |
Parental protein coverage: | 78.89 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | FYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKEGGLGPMNIPLVSDSKRTI |
F..L.....C.......S.......KLNCQVIGAS.DSHFCHLAWINTPKKEG.LGPMNIPLVSD.K.T. | |
Retrocopy | FFTLLTSPLCAPQKSLLSMTGQKNLKLNCQVIGASEDSHFCHLAWINTPKKEGDLGPMNIPLVSDPKCTT |
Parental | AQDYGVLKVDEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSD |
AQDY.VLKVDEGISFR.LF.IDDKGILRQITVNDLPVG.SV.ETLR.VQ...FTDKHGEVCPAGWKPGSD | |
Retrocopy | AQDYEVLKVDEGISFRSLF-IDDKGILRQITVNDLPVGNSVNETLRPVQTSKFTDKHGEVCPAGWKPGSD |
Parental | TIKPDVQK-SREYFAKQK |
TIKPDVQ..SREYFAK.K | |
Retrocopy | TIKPDVQR<SREYFAKPK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |