RetrogeneDB ID: | retro_etel_309 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5084:50677..51364(+) | ||
Located in intron of: | ENSETEG00000011260 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AK2 | ||
Ensembl ID: | ENSETEG00000002333 | ||
Aliases: | None | ||
Description: | adenylate kinase 2 [Source:HGNC Symbol;Acc:362] |
Percent Identity: | 73.71 % |
Parental protein coverage: | 95.44 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | NVPADEPAQEYPKGFRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAG |
NVPAD..A.EYPKG..AVL..P.GAGK.TQAPRLAE.FCVC.LATGDM.RAM........KKLKA.MD.G | |
Retrocopy | NVPAD*LA*EYPKGIWAVLPEPCGAGKDTQAPRLAEEFCVCLLATGDMPRAMEFLAQSSRKKLKARMDTG |
Parental | KLVSDEMVVELIEKNLETPSCRNGFLLDGFPRTVRQAEMLDDLMVKRQEKLDSVVEFRIPDA-LLIRRIT |
.LVSDEMVVELIEKNLETPSC...FLL.GFPRTV.QA.ML..L.VKR.E.LD.V.EF.IPD..L..R.IT | |
Retrocopy | NLVSDEMVVELIEKNLETPSCKSDFLLAGFPRTVKQAKMLTNLTVKRKE*LDFVIEFHIPDS>LIRR-IT |
Parental | GRLIHPMSGRSYHEEFNPPKEPMKDDITG-EPLVRRSDDNEKALKIRLESYHTQTTPLVDYYQKRGIHCA |
.RLIHPMS..SYHEEFN.PKEP.KDD.TG.E.LVR..DDNEKALKI..E..HTQTT.LVDYYQK.GI.CA | |
Retrocopy | RRLIHPMSDHSYHEEFNSPKEPIKDDVTG<EALVRQVDDNEKALKIHPEACHTQTTTLVDYYQKWGIRCA |
Parental | IDASQTPDVVFASILAAFSKAT |
IDASQTPDVVF.SILAAF.KAT | |
Retrocopy | IDASQTPDVVFVSILAAFCKAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |