RetrogeneDB ID: | retro_etel_327 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5387:237511..237751(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 54.22 % |
Parental protein coverage: | 93.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKT |
MV...TY...L....A.NKTRLS.T.GNRIV.LYTKK.G..PKSAC....G..R..RAVRPK..M...K. | |
Retrocopy | MVHCVTYPHMLPLSVAPNKTRLSQTAGNRIVHLYTKKAGQVPKSACSIHLGQFREGRAVRPKIPMK*LKK |
Parental | KKHVSRAYGGSMC |
....S...GGSMC | |
Retrocopy | EQGLS---GGSMC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |