RetrogeneDB ID: | retro_etel_343 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5702:187935..188277(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.3 % |
Parental protein coverage: | 72.15 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAEQAPKSVLFVCLGNICRSPIAEAVFRKLVTDQNLLDKWIIDSGAVSDWNVGRSPDPRAVSYLGSHDIN |
MAEQAPKSVLFVCLGNICR.P.AE.VFRKLVTDQNL.DKW.IDS.A.S.......PD.R.......H.I. | |
Retrocopy | MAEQAPKSVLFVCLGNICRLPVAETVFRKLVTDQNL*DKWRIDSAATSIYEIENPPDYRGQNCMKKHGIP |
Parental | SAHKARQITKEDFATFDFILCMDESNLRDLTRKGNQVKNCKAKI |
..H.ARQITKEDFATFD..LCMD.SNLRDL.RKGNQ.K.C.A.I | |
Retrocopy | MNHFARQITKEDFATFDYMLCMDDSNLRDLSRKGNQLKDCRAMI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |